Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RoraP51448 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RoraP51448 Gm12203-201ENSMUST00000118235 598 ntBASIC12.57□□□□□ -0.4
RoraP51448 Gm12209-201ENSMUST00000120089 596 ntBASIC12.57□□□□□ -0.4
RoraP51448 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.57□□□□□ -0.4
RoraP51448 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RoraP51448 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RoraP51448 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RoraP51448 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.57□□□□□ -0.4
RoraP51448 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RoraP51448 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.57□□□□□ -0.4
RoraP51448 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RoraP51448 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RoraP51448 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RoraP51448 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RoraP51448 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RoraP51448 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.57□□□□□ -0.4
RoraP51448 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.57□□□□□ -0.4
RoraP51448 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RoraP51448 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RoraP51448 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RoraP51448 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RoraP51448 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RoraP51448 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.57□□□□□ -0.4
RoraP51448 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RoraP51448 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.57□□□□□ -0.4
RoraP51448 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RoraP51448 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RoraP51448 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RoraP51448 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RoraP51448 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RoraP51448 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RoraP51448 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RoraP51448 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RoraP51448 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RoraP51448 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RoraP51448 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RoraP51448 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RoraP51448 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.56□□□□□ -0.4
RoraP51448 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RoraP51448 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RoraP51448 Gm23931-201ENSMUST00000103842 109 ntBASIC12.56□□□□□ -0.4
RoraP51448 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RoraP51448 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RoraP51448 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RoraP51448 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
RoraP51448 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
RoraP51448 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.56□□□□□ -0.4
RoraP51448 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RoraP51448 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RoraP51448 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.56□□□□□ -0.4
RoraP51448 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RoraP51448 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RoraP51448 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RoraP51448 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
RoraP51448 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RoraP51448 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RoraP51448 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RoraP51448 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RoraP51448 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.55□□□□□ -0.4
RoraP51448 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RoraP51448 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RoraP51448 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.55□□□□□ -0.4
RoraP51448 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RoraP51448 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RoraP51448 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RoraP51448 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RoraP51448 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RoraP51448 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RoraP51448 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RoraP51448 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.55□□□□□ -0.4
RoraP51448 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.55□□□□□ -0.4
RoraP51448 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.55□□□□□ -0.4
RoraP51448 Gm17420-201ENSMUST00000164753 153 ntBASIC12.55□□□□□ -0.4
RoraP51448 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.55□□□□□ -0.4
RoraP51448 Gm4271-201ENSMUST00000174444 973 ntBASIC12.55□□□□□ -0.4
RoraP51448 Gm27514-201ENSMUST00000183692 110 ntBASIC12.55□□□□□ -0.4
RoraP51448 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.55□□□□□ -0.4
RoraP51448 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
RoraP51448 Gm6007-201ENSMUST00000208170 823 ntBASIC12.55□□□□□ -0.4
RoraP51448 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.55□□□□□ -0.4
RoraP51448 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.55□□□□□ -0.4
RoraP51448 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RoraP51448 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RoraP51448 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RoraP51448 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RoraP51448 Gm10478-201ENSMUST00000084451 396 ntBASIC12.55□□□□□ -0.4
RoraP51448 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RoraP51448 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RoraP51448 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.55□□□□□ -0.4
RoraP51448 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.55□□□□□ -0.4
RoraP51448 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RoraP51448 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.55□□□□□ -0.4
RoraP51448 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.55□□□□□ -0.4
RoraP51448 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
RoraP51448 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RoraP51448 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.55□□□□□ -0.4
RoraP51448 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RoraP51448 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
RoraP51448 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms