Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Sox18P43680 Gm11439-201ENSMUST00000118598 409 ntBASIC12.8□□□□□ -0.36
Sox18P43680 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Gm37604-201ENSMUST00000191749 1272 ntBASIC12.8□□□□□ -0.36
Sox18P43680 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.8□□□□□ -0.36
Sox18P43680 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Gm18212-201ENSMUST00000211678 889 ntBASIC12.8□□□□□ -0.36
Sox18P43680 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.8□□□□□ -0.36
Sox18P43680 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC12.8□□□□□ -0.36
Sox18P43680 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.8□□□□□ -0.36
Sox18P43680 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.8□□□□□ -0.36
Sox18P43680 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.8□□□□□ -0.36
Sox18P43680 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.8□□□□□ -0.36
Sox18P43680 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sox18P43680 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.8□□□□□ -0.36
Sox18P43680 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox18P43680 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Sox18P43680 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
Sox18P43680 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Sox18P43680 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Mir698-201ENSMUST00000102164 109 ntBASIC12.79□□□□□ -0.36
Sox18P43680 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Gm11591-201ENSMUST00000120063 702 ntBASIC12.79□□□□□ -0.36
Sox18P43680 Gm5970-201ENSMUST00000131638 1216 ntBASIC12.79□□□□□ -0.36
Sox18P43680 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.79□□□□□ -0.36
Sox18P43680 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.79□□□□□ -0.36
Sox18P43680 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC12.79□□□□□ -0.36
Sox18P43680 Gm8099-201ENSMUST00000200510 742 ntBASIC12.79□□□□□ -0.36
Sox18P43680 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.79□□□□□ -0.36
Sox18P43680 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.79□□□□□ -0.36
Sox18P43680 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Sox18P43680 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.79□□□□□ -0.36
Sox18P43680 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox18P43680 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.78□□□□□ -0.36
Sox18P43680 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.78□□□□□ -0.36
Sox18P43680 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.78□□□□□ -0.36
Sox18P43680 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sox18P43680 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.78□□□□□ -0.36
Sox18P43680 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Sox18P43680 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sox18P43680 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 Gm13183-201ENSMUST00000118615 789 ntBASIC12.78□□□□□ -0.36
Sox18P43680 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox18P43680 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms