Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Slc6a1P31648 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Slc6a1P31648 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Slc6a1P31648 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.44□□□□□ -0.58
Slc6a1P31648 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Slc6a1P31648 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.44□□□□□ -0.58
Slc6a1P31648 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.43□□□□□ -0.58
Slc6a1P31648 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.43□□□□□ -0.58
Slc6a1P31648 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Slc6a1P31648 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Slc6a1P31648 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Slc6a1P31648 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Slc6a1P31648 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.43□□□□□ -0.58
Slc6a1P31648 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Slc6a1P31648 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Slc6a1P31648 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Slc6a1P31648 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Slc6a1P31648 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Slc6a1P31648 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.43□□□□□ -0.58
Slc6a1P31648 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Slc6a1P31648 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Slc6a1P31648 Mir449b-201ENSMUST00000104833 80 ntBASIC11.43□□□□□ -0.58
Slc6a1P31648 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.43□□□□□ -0.58
Slc6a1P31648 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Slc6a1P31648 Gm15957-201ENSMUST00000118893 974 ntBASIC11.43□□□□□ -0.58
Slc6a1P31648 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.43□□□□□ -0.58
Slc6a1P31648 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.43□□□□□ -0.58
Slc6a1P31648 Mir6956-201ENSMUST00000183598 62 ntBASIC11.43□□□□□ -0.58
Slc6a1P31648 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Slc6a1P31648 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.43□□□□□ -0.58
Slc6a1P31648 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.43□□□□□ -0.58
Slc6a1P31648 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.43□□□□□ -0.58
Slc6a1P31648 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.43□□□□□ -0.58
Slc6a1P31648 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.43□□□□□ -0.58
Slc6a1P31648 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Slc6a1P31648 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Slc6a1P31648 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Slc6a1P31648 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Slc6a1P31648 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Slc6a1P31648 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Slc6a1P31648 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Slc6a1P31648 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.42□□□□□ -0.58
Slc6a1P31648 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.42□□□□□ -0.58
Slc6a1P31648 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.42□□□□□ -0.58
Slc6a1P31648 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Slc6a1P31648 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.42□□□□□ -0.58
Slc6a1P31648 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Slc6a1P31648 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Slc6a1P31648 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Slc6a1P31648 Gm29741-201ENSMUST00000192667 421 ntBASIC11.42□□□□□ -0.58
Slc6a1P31648 Gm38225-201ENSMUST00000194001 393 ntBASIC11.42□□□□□ -0.58
Slc6a1P31648 Gm7774-201ENSMUST00000200064 533 ntBASIC11.42□□□□□ -0.58
Slc6a1P31648 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Slc6a1P31648 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Slc6a1P31648 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Slc6a1P31648 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc6a1P31648 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Slc6a1P31648 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms