Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nedd8P29595 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.23□□□□□ -0.45
Nedd8P29595 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.23□□□□□ -0.45
Nedd8P29595 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nedd8P29595 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.22□□□□□ -0.45
Nedd8P29595 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Nedd8P29595 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.22□□□□□ -0.45
Nedd8P29595 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nedd8P29595 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.22□□□□□ -0.45
Nedd8P29595 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.22□□□□□ -0.45
Nedd8P29595 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.22□□□□□ -0.45
Nedd8P29595 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Gm7461-201ENSMUST00000058918 827 ntBASIC12.22□□□□□ -0.45
Nedd8P29595 Mir497b-201ENSMUST00000093601 125 ntBASIC12.22□□□□□ -0.45
Nedd8P29595 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.22□□□□□ -0.45
Nedd8P29595 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.22□□□□□ -0.45
Nedd8P29595 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.22□□□□□ -0.45
Nedd8P29595 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.22□□□□□ -0.45
Nedd8P29595 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nedd8P29595 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nedd8P29595 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.22□□□□□ -0.45
Nedd8P29595 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.22□□□□□ -0.45
Nedd8P29595 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.21□□□□□ -0.45
Nedd8P29595 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Nedd8P29595 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.21□□□□□ -0.45
Nedd8P29595 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Nedd8P29595 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.21□□□□□ -0.45
Nedd8P29595 Gm37714-201ENSMUST00000194742 342 ntBASIC12.21□□□□□ -0.45
Nedd8P29595 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.21□□□□□ -0.45
Nedd8P29595 Gm6376-201ENSMUST00000209407 580 ntBASIC12.21□□□□□ -0.45
Nedd8P29595 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.21□□□□□ -0.45
Nedd8P29595 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Nedd8P29595 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nedd8P29595 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Nedd8P29595 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Nedd8P29595 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nedd8P29595 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nedd8P29595 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms