Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp3P28862 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp3P28862 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp3P28862 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp3P28862 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp3P28862 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp3P28862 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp3P28862 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Mmp3P28862 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.16□□□□□ -0.14
Mmp3P28862 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.16□□□□□ -0.14
Mmp3P28862 Cts7-204ENSMUST00000225321 1257 ntBASIC14.16□□□□□ -0.14
Mmp3P28862 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp3P28862 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp3P28862 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Mmp3P28862 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Mmp3P28862 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp3P28862 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp3P28862 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp3P28862 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp3P28862 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.16□□□□□ -0.14
Mmp3P28862 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Mmp3P28862 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp3P28862 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp3P28862 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp3P28862 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp3P28862 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Mmp3P28862 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.16□□□□□ -0.14
Mmp3P28862 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
Mmp3P28862 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Mmp3P28862 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Mmp3P28862 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Gm13342-201ENSMUST00000121055 207 ntBASIC14.15□□□□□ -0.14
Mmp3P28862 Gm17208-201ENSMUST00000168388 535 ntBASIC14.15□□□□□ -0.14
Mmp3P28862 Gm6334-201ENSMUST00000207083 228 ntBASIC14.15□□□□□ -0.14
Mmp3P28862 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Gm9368-201ENSMUST00000219348 831 ntBASIC14.15□□□□□ -0.14
Mmp3P28862 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.15□□□□□ -0.14
Mmp3P28862 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Mmp3P28862 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Mmp3P28862 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.15□□□□□ -0.14
Mmp3P28862 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp3P28862 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp3P28862 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Mmp3P28862 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp3P28862 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp3P28862 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp3P28862 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Mmp3P28862 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.14□□□□□ -0.15
Mmp3P28862 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp3P28862 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp3P28862 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp3P28862 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.14□□□□□ -0.15
Mmp3P28862 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp3P28862 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.14□□□□□ -0.15
Mmp3P28862 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp3P28862 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.14□□□□□ -0.15
Mmp3P28862 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.14□□□□□ -0.15
Mmp3P28862 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Mmp3P28862 Gm7584-201ENSMUST00000175829 940 ntBASIC14.14□□□□□ -0.15
Mmp3P28862 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.14□□□□□ -0.15
Mmp3P28862 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.14□□□□□ -0.15
Mmp3P28862 Gm10608-202ENSMUST00000213924 676 ntBASIC14.14□□□□□ -0.15
Mmp3P28862 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.14□□□□□ -0.15
Mmp3P28862 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.14□□□□□ -0.15
Mmp3P28862 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.14□□□□□ -0.15
Mmp3P28862 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp3P28862 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Mmp3P28862 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp3P28862 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp3P28862 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp3P28862 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Mmp3P28862 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.14□□□□□ -0.15
Mmp3P28862 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.14□□□□□ -0.15
Mmp3P28862 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Mmp3P28862 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp3P28862 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp3P28862 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp3P28862 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Mmp3P28862 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp3P28862 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms