Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfrsf1aP25118 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfrsf1aP25118 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfrsf1aP25118 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfrsf1aP25118 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfrsf1aP25118 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Gm12485-201ENSMUST00000119641 291 ntBASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Gm20949-201ENSMUST00000206478 952 ntBASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Tnfrsf1aP25118 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Gm12151-201ENSMUST00000121374 290 ntBASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Gm15487-201ENSMUST00000122373 465 ntBASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Gm9797-201ENSMUST00000052902 613 ntBASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.13□□□□□ -0.63
Tnfrsf1aP25118 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1aP25118 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms