Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Irf8P23611 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Irf8P23611 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.31□□□□□ -0.12
Irf8P23611 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.3□□□□□ -0.12
Irf8P23611 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.3□□□□□ -0.12
Irf8P23611 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.3□□□□□ -0.12
Irf8P23611 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.3□□□□□ -0.12
Irf8P23611 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Irf8P23611 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.3□□□□□ -0.12
Irf8P23611 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.3□□□□□ -0.12
Irf8P23611 Gm11424-201ENSMUST00000121929 829 ntBASIC14.3□□□□□ -0.12
Irf8P23611 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Irf8P23611 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Irf8P23611 Gm8652-201ENSMUST00000181363 964 ntBASIC14.3□□□□□ -0.12
Irf8P23611 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.3□□□□□ -0.12
Irf8P23611 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.3□□□□□ -0.12
Irf8P23611 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.3□□□□□ -0.12
Irf8P23611 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Irf8P23611 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.3□□□□□ -0.12
Irf8P23611 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.3□□□□□ -0.12
Irf8P23611 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Irf8P23611 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Irf8P23611 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.29□□□□□ -0.12
Irf8P23611 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Irf8P23611 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.29□□□□□ -0.12
Irf8P23611 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Irf8P23611 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.29□□□□□ -0.12
Irf8P23611 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.29□□□□□ -0.12
Irf8P23611 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.29□□□□□ -0.12
Irf8P23611 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.29□□□□□ -0.12
Irf8P23611 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.29□□□□□ -0.12
Irf8P23611 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.29□□□□□ -0.12
Irf8P23611 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Irf8P23611 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.29□□□□□ -0.12
Irf8P23611 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.29□□□□□ -0.12
Irf8P23611 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.29□□□□□ -0.12
Irf8P23611 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Irf8P23611 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.29□□□□□ -0.12
Irf8P23611 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.29□□□□□ -0.12
Irf8P23611 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Irf8P23611 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.29□□□□□ -0.12
Irf8P23611 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.29□□□□□ -0.12
Irf8P23611 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Irf8P23611 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Irf8P23611 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Irf8P23611 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Irf8P23611 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.28□□□□□ -0.12
Irf8P23611 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Irf8P23611 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.28□□□□□ -0.12
Irf8P23611 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Irf8P23611 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Irf8P23611 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Irf8P23611 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Irf8P23611 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Irf8P23611 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Irf8P23611 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.28□□□□□ -0.12
Irf8P23611 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Irf8P23611 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Irf8P23611 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Irf8P23611 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms