Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Hmgn1P18608 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Hmgn1P18608 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.14□□□□□ -0.47
Hmgn1P18608 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.14□□□□□ -0.47
Hmgn1P18608 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Hmgn1P18608 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hmgn1P18608 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hmgn1P18608 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Hmgn1P18608 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.14□□□□□ -0.47
Hmgn1P18608 Gm25144-201ENSMUST00000179561 110 ntBASIC12.14□□□□□ -0.47
Hmgn1P18608 Gm25352-201ENSMUST00000179815 110 ntBASIC12.14□□□□□ -0.47
Hmgn1P18608 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.14□□□□□ -0.47
Hmgn1P18608 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.14□□□□□ -0.47
Hmgn1P18608 Gm5779-201ENSMUST00000218467 910 ntBASIC12.14□□□□□ -0.47
Hmgn1P18608 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Hmgn1P18608 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.14□□□□□ -0.47
Hmgn1P18608 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.14□□□□□ -0.47
Hmgn1P18608 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
Hmgn1P18608 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hmgn1P18608 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgn1P18608 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.14□□□□□ -0.47
Hmgn1P18608 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hmgn1P18608 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hmgn1P18608 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.13□□□□□ -0.47
Hmgn1P18608 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.13□□□□□ -0.47
Hmgn1P18608 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Hmgn1P18608 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Hmgn1P18608 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.13□□□□□ -0.47
Hmgn1P18608 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.13□□□□□ -0.47
Hmgn1P18608 Gm25948-201ENSMUST00000175334 112 ntBASIC12.13□□□□□ -0.47
Hmgn1P18608 Gm3436-201ENSMUST00000179930 840 ntBASIC12.13□□□□□ -0.47
Hmgn1P18608 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.13□□□□□ -0.47
Hmgn1P18608 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.13□□□□□ -0.47
Hmgn1P18608 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.13□□□□□ -0.47
Hmgn1P18608 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hmgn1P18608 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hmgn1P18608 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.13□□□□□ -0.47
Hmgn1P18608 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.13□□□□□ -0.47
Hmgn1P18608 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hmgn1P18608 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hmgn1P18608 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn1P18608 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hmgn1P18608 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hmgn1P18608 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hmgn1P18608 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn1P18608 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms