Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc8P09025 Gm13570-201ENSMUST00000140763 309 ntBASIC14.02□□□□□ -0.17
Hoxc8P09025 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.02□□□□□ -0.17
Hoxc8P09025 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc8P09025 Gm15276-201ENSMUST00000145953 498 ntBASIC14.02□□□□□ -0.17
Hoxc8P09025 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.02□□□□□ -0.17
Hoxc8P09025 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Hoxc8P09025 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.02□□□□□ -0.17
Hoxc8P09025 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc8P09025 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.02□□□□□ -0.17
Hoxc8P09025 Gm44967-201ENSMUST00000207047 631 ntBASIC14.02□□□□□ -0.17
Hoxc8P09025 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc8P09025 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.02□□□□□ -0.17
Hoxc8P09025 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Hoxc8P09025 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc8P09025 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc8P09025 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc8P09025 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Hoxc8P09025 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.02□□□□□ -0.17
Hoxc8P09025 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hoxc8P09025 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc8P09025 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc8P09025 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc8P09025 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hoxc8P09025 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc8P09025 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.02□□□□□ -0.17
Hoxc8P09025 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc8P09025 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hoxc8P09025 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Hoxc8P09025 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.01□□□□□ -0.17
Hoxc8P09025 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hoxc8P09025 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Gm24990-201ENSMUST00000157406 323 ntBASIC14.01□□□□□ -0.17
Hoxc8P09025 Gm16296-201ENSMUST00000159905 325 ntBASIC14.01□□□□□ -0.17
Hoxc8P09025 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hoxc8P09025 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.01□□□□□ -0.17
Hoxc8P09025 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.01□□□□□ -0.17
Hoxc8P09025 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Hoxc8P09025 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.01□□□□□ -0.17
Hoxc8P09025 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.01□□□□□ -0.17
Hoxc8P09025 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Hoxc8P09025 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.01□□□□□ -0.17
Hoxc8P09025 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.01□□□□□ -0.17
Hoxc8P09025 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc8P09025 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Hoxc8P09025 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Gm5989-201ENSMUST00000096092 2077 ntBASIC14□□□□□ -0.17
Hoxc8P09025 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14□□□□□ -0.17
Hoxc8P09025 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hoxc8P09025 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14□□□□□ -0.17
Hoxc8P09025 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc8P09025 Gm25043-201ENSMUST00000158604 212 ntBASIC14□□□□□ -0.17
Hoxc8P09025 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14□□□□□ -0.17
Hoxc8P09025 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14□□□□□ -0.17
Hoxc8P09025 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14□□□□□ -0.17
Hoxc8P09025 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14□□□□□ -0.17
Hoxc8P09025 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14□□□□□ -0.17
Hoxc8P09025 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms