Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.65□□□□□ -0.54
P04224 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.65□□□□□ -0.54
P04224 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
P04224 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
P04224 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.55
P04224 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
P04224 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
P04224 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
P04224 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
P04224 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
P04224 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
P04224 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
P04224 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.64□□□□□ -0.55
P04224 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
P04224 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
P04224 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
P04224 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.64□□□□□ -0.55
P04224 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.64□□□□□ -0.55
P04224 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
P04224 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
P04224 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
P04224 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
P04224 Gm38225-201ENSMUST00000194001 393 ntBASIC11.64□□□□□ -0.55
P04224 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.64□□□□□ -0.55
P04224 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.64□□□□□ -0.55
P04224 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.64□□□□□ -0.55
P04224 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.64□□□□□ -0.55
P04224 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.64□□□□□ -0.55
P04224 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P04224 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P04224 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P04224 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
P04224 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P04224 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
P04224 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P04224 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P04224 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.63□□□□□ -0.55
P04224 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.63□□□□□ -0.55
P04224 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P04224 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
P04224 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
P04224 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.63□□□□□ -0.55
P04224 Gm2810-201ENSMUST00000118681 990 ntBASIC11.63□□□□□ -0.55
P04224 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.63□□□□□ -0.55
P04224 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
P04224 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
P04224 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.63□□□□□ -0.55
P04224 AA543401-201ENSMUST00000164248 1269 ntBASIC11.63□□□□□ -0.55
P04224 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
P04224 Gm29310-201ENSMUST00000185468 696 ntBASIC11.63□□□□□ -0.55
P04224 Gm21825-201ENSMUST00000185728 696 ntBASIC11.63□□□□□ -0.55
P04224 Gm29109-201ENSMUST00000185895 696 ntBASIC11.63□□□□□ -0.55
P04224 Gm21896-201ENSMUST00000186520 696 ntBASIC11.63□□□□□ -0.55
P04224 Gm21873-201ENSMUST00000186728 696 ntBASIC11.63□□□□□ -0.55
P04224 Gm21794-201ENSMUST00000187056 696 ntBASIC11.63□□□□□ -0.55
P04224 Gm21880-201ENSMUST00000187275 696 ntBASIC11.63□□□□□ -0.55
P04224 Gm21826-201ENSMUST00000187451 696 ntBASIC11.63□□□□□ -0.55
P04224 Gm21198-201ENSMUST00000188393 696 ntBASIC11.63□□□□□ -0.55
P04224 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.63□□□□□ -0.55
P04224 Gm21749-201ENSMUST00000189343 696 ntBASIC11.63□□□□□ -0.55
P04224 Gm21901-201ENSMUST00000189568 696 ntBASIC11.63□□□□□ -0.55
P04224 Gm29424-201ENSMUST00000189716 696 ntBASIC11.63□□□□□ -0.55
P04224 Gm28599-201ENSMUST00000189838 694 ntBASIC11.63□□□□□ -0.55
P04224 Gm21867-201ENSMUST00000189917 696 ntBASIC11.63□□□□□ -0.55
P04224 Gm29269-201ENSMUST00000190087 696 ntBASIC11.63□□□□□ -0.55
P04224 Gm21722-201ENSMUST00000190153 696 ntBASIC11.63□□□□□ -0.55
P04224 Gm28423-201ENSMUST00000190701 696 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms