Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Gm25016-201ENSMUST00000158399 131 ntBASIC9.31□□□□□ -0.92
Hbb-b1P02088 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Hbb-b1P02088 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC9.31□□□□□ -0.92
Hbb-b1P02088 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.31□□□□□ -0.92
Hbb-b1P02088 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Hbb-b1P02088 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hbb-b1P02088 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Gm44758-201ENSMUST00000206096 2068 ntBASIC9.3□□□□□ -0.92
Hbb-b1P02088 AC160410.1-201ENSMUST00000219298 1972 ntBASIC9.3□□□□□ -0.92
Hbb-b1P02088 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Mir7221-201ENSMUST00000184009 72 ntBASIC9.3□□□□□ -0.92
Hbb-b1P02088 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Gm18032-201ENSMUST00000222541 538 ntBASIC9.3□□□□□ -0.92
Hbb-b1P02088 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.3□□□□□ -0.92
Hbb-b1P02088 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.3□□□□□ -0.92
Hbb-b1P02088 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Hbb-b1P02088 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hbb-b1P02088 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC9.29□□□□□ -0.92
Hbb-b1P02088 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hbb-b1P02088 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Hbb-b1P02088 AC154527.4-201ENSMUST00000224364 1667 ntBASIC9.29□□□□□ -0.92
Hbb-b1P02088 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hbb-b1P02088 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hbb-b1P02088 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.29□□□□□ -0.92
Hbb-b1P02088 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hbb-b1P02088 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Hbb-b1P02088 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Hbb-b1P02088 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Hbb-b1P02088 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC9.29□□□□□ -0.92
Hbb-b1P02088 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hbb-b1P02088 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hbb-b1P02088 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms