Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IghmP01872 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
IghmP01872 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
IghmP01872 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IghmP01872 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
IghmP01872 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
IghmP01872 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
IghmP01872 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IghmP01872 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IghmP01872 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.44□□□□□ -0.42
IghmP01872 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.44□□□□□ -0.42
IghmP01872 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IghmP01872 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
IghmP01872 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IghmP01872 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IghmP01872 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IghmP01872 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
IghmP01872 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
IghmP01872 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
IghmP01872 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IghmP01872 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
IghmP01872 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
IghmP01872 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.44□□□□□ -0.42
IghmP01872 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
IghmP01872 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.43□□□□□ -0.42
IghmP01872 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.43□□□□□ -0.42
IghmP01872 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
IghmP01872 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.43□□□□□ -0.42
IghmP01872 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.43□□□□□ -0.42
IghmP01872 Gm6447-201ENSMUST00000118905 835 ntBASIC12.43□□□□□ -0.42
IghmP01872 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.43□□□□□ -0.42
IghmP01872 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Gm42550-201ENSMUST00000201553 960 ntBASIC12.43□□□□□ -0.42
IghmP01872 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
IghmP01872 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.43□□□□□ -0.42
IghmP01872 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
IghmP01872 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
IghmP01872 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
IghmP01872 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.43□□□□□ -0.42
IghmP01872 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
IghmP01872 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.42□□□□□ -0.42
IghmP01872 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
IghmP01872 Gm15920-201ENSMUST00000118998 402 ntBASIC12.42□□□□□ -0.42
IghmP01872 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.42□□□□□ -0.42
IghmP01872 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.42□□□□□ -0.42
IghmP01872 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 Mir7023-201ENSMUST00000185093 64 ntBASIC12.42□□□□□ -0.42
IghmP01872 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.42□□□□□ -0.42
IghmP01872 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 Gm42612-201ENSMUST00000197986 623 ntBASIC12.42□□□□□ -0.42
IghmP01872 Gm43170-201ENSMUST00000199827 612 ntBASIC12.42□□□□□ -0.42
IghmP01872 Gm7730-201ENSMUST00000212486 454 ntBASIC12.42□□□□□ -0.42
IghmP01872 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
IghmP01872 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.42□□□□□ -0.42
IghmP01872 Gm26315-201ENSMUST00000083890 321 ntBASIC12.42□□□□□ -0.42
IghmP01872 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
IghmP01872 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.42□□□□□ -0.42
IghmP01872 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
IghmP01872 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.42□□□□□ -0.42
IghmP01872 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
IghmP01872 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms