Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.32□□□□□ -0.12
Vti1aO89116 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vti1aO89116 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.32□□□□□ -0.12
Vti1aO89116 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vti1aO89116 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1aO89116 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1aO89116 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1aO89116 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1aO89116 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1aO89116 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.31□□□□□ -0.12
Vti1aO89116 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1aO89116 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1aO89116 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Vti1aO89116 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.31□□□□□ -0.12
Vti1aO89116 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.31□□□□□ -0.12
Vti1aO89116 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1aO89116 Gm27331-201ENSMUST00000183705 60 ntBASIC14.31□□□□□ -0.12
Vti1aO89116 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1aO89116 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.31□□□□□ -0.12
Vti1aO89116 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.31□□□□□ -0.12
Vti1aO89116 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1aO89116 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vti1aO89116 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1aO89116 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Vti1aO89116 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1aO89116 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1aO89116 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1aO89116 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.31□□□□□ -0.12
Vti1aO89116 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vti1aO89116 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1aO89116 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Vti1aO89116 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.3□□□□□ -0.12
Vti1aO89116 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.3□□□□□ -0.12
Vti1aO89116 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.3□□□□□ -0.12
Vti1aO89116 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.3□□□□□ -0.12
Vti1aO89116 Proscos-202ENSMUST00000178990 666 ntBASIC14.3□□□□□ -0.12
Vti1aO89116 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Gm8598-201ENSMUST00000221184 836 ntBASIC14.3□□□□□ -0.12
Vti1aO89116 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Vti1aO89116 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vti1aO89116 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Vti1aO89116 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vti1aO89116 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Vti1aO89116 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vti1aO89116 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vti1aO89116 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vti1aO89116 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vti1aO89116 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vti1aO89116 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vti1aO89116 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vti1aO89116 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vti1aO89116 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vti1aO89116 Gm8213-201ENSMUST00000118191 441 ntBASIC14.29□□□□□ -0.12
Vti1aO89116 Gm1335-201ENSMUST00000121653 386 ntBASIC14.29□□□□□ -0.12
Vti1aO89116 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Vti1aO89116 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.29□□□□□ -0.12
Vti1aO89116 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.29□□□□□ -0.12
Vti1aO89116 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vti1aO89116 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vti1aO89116 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vti1aO89116 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vti1aO89116 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.29□□□□□ -0.12
Vti1aO89116 Gm26315-201ENSMUST00000083890 321 ntBASIC14.29□□□□□ -0.12
Vti1aO89116 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vti1aO89116 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vti1aO89116 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vti1aO89116 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.29□□□□□ -0.12
Vti1aO89116 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vti1aO89116 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vti1aO89116 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms