Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClppO88696 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.03□□□□□ -0.32
ClppO88696 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.03□□□□□ -0.32
ClppO88696 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.03□□□□□ -0.32
ClppO88696 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClppO88696 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.03□□□□□ -0.32
ClppO88696 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClppO88696 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClppO88696 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.03□□□□□ -0.32
ClppO88696 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClppO88696 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.03□□□□□ -0.32
ClppO88696 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClppO88696 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClppO88696 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClppO88696 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
ClppO88696 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.02□□□□□ -0.32
ClppO88696 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClppO88696 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClppO88696 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClppO88696 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClppO88696 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.02□□□□□ -0.32
ClppO88696 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
ClppO88696 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClppO88696 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClppO88696 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.02□□□□□ -0.33
ClppO88696 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.02□□□□□ -0.33
ClppO88696 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
ClppO88696 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.02□□□□□ -0.33
ClppO88696 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ClppO88696 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.02□□□□□ -0.33
ClppO88696 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClppO88696 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClppO88696 Gm9899-201ENSMUST00000065519 555 ntBASIC13.02□□□□□ -0.33
ClppO88696 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.02□□□□□ -0.33
ClppO88696 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClppO88696 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClppO88696 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClppO88696 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ClppO88696 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClppO88696 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClppO88696 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.01□□□□□ -0.33
ClppO88696 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
ClppO88696 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ClppO88696 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ClppO88696 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.01□□□□□ -0.33
ClppO88696 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.01□□□□□ -0.33
ClppO88696 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.01□□□□□ -0.33
ClppO88696 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ClppO88696 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.01□□□□□ -0.33
ClppO88696 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
ClppO88696 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClppO88696 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
ClppO88696 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ClppO88696 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ClppO88696 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ClppO88696 Gm5912-201ENSMUST00000122282 1438 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms