Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Pde6dO55057 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
Pde6dO55057 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 Gm13597-201ENSMUST00000121239 375 ntBASIC10.46□□□□□ -0.73
Pde6dO55057 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Pde6dO55057 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC10.46□□□□□ -0.73
Pde6dO55057 Gm5177-201ENSMUST00000183092 997 ntBASIC10.46□□□□□ -0.73
Pde6dO55057 Ighv1-51-201ENSMUST00000192903 354 ntBASIC10.46□□□□□ -0.73
Pde6dO55057 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.46□□□□□ -0.73
Pde6dO55057 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Pde6dO55057 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC10.46□□□□□ -0.73
Pde6dO55057 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pde6dO55057 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.73
Pde6dO55057 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.46□□□□□ -0.74
Pde6dO55057 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.46□□□□□ -0.74
Pde6dO55057 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.46□□□□□ -0.74
Pde6dO55057 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
Pde6dO55057 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Pde6dO55057 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Pde6dO55057 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pde6dO55057 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.46□□□□□ -0.74
Pde6dO55057 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.45□□□□□ -0.74
Pde6dO55057 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC10.45□□□□□ -0.74
Pde6dO55057 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Pde6dO55057 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.45□□□□□ -0.74
Pde6dO55057 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Pde6dO55057 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pde6dO55057 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC10.45□□□□□ -0.74
Pde6dO55057 Gm7153-201ENSMUST00000117092 455 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm13823-201ENSMUST00000119930 345 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC10.45□□□□□ -0.74
Pde6dO55057 Gm18737-201ENSMUST00000173594 937 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.45□□□□□ -0.74
Pde6dO55057 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Pde6dO55057 Gm29310-201ENSMUST00000185468 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm21825-201ENSMUST00000185728 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm29109-201ENSMUST00000185895 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm21896-201ENSMUST00000186520 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm21873-201ENSMUST00000186728 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm17807-201ENSMUST00000186869 298 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm21794-201ENSMUST00000187056 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm21880-201ENSMUST00000187275 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm21826-201ENSMUST00000187451 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm21198-201ENSMUST00000188393 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm21749-201ENSMUST00000189343 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm21901-201ENSMUST00000189568 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm29424-201ENSMUST00000189716 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm28599-201ENSMUST00000189838 694 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm21867-201ENSMUST00000189917 696 ntBASIC10.45□□□□□ -0.74
Pde6dO55057 Gm29269-201ENSMUST00000190087 696 ntBASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms