Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdmt1O55055 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdmt1O55055 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdmt1O55055 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trdmt1O55055 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.55□□□□□ -0.08
Trdmt1O55055 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trdmt1O55055 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.55□□□□□ -0.08
Trdmt1O55055 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdmt1O55055 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.55□□□□□ -0.08
Trdmt1O55055 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.55□□□□□ -0.08
Trdmt1O55055 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.55□□□□□ -0.08
Trdmt1O55055 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.55□□□□□ -0.08
Trdmt1O55055 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.55□□□□□ -0.08
Trdmt1O55055 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdmt1O55055 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdmt1O55055 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdmt1O55055 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdmt1O55055 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trdmt1O55055 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdmt1O55055 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.55□□□□□ -0.08
Trdmt1O55055 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdmt1O55055 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdmt1O55055 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Trdmt1O55055 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdmt1O55055 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdmt1O55055 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trdmt1O55055 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trdmt1O55055 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trdmt1O55055 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trdmt1O55055 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trdmt1O55055 Gm24830-201ENSMUST00000102024 166 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Gm25890-201ENSMUST00000177643 165 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Gm22614-201ENSMUST00000178300 165 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Gm26956-201ENSMUST00000182176 986 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.54□□□□□ -0.08
Trdmt1O55055 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.54□□□□□ -0.08
Trdmt1O55055 Gm31256-201ENSMUST00000194705 506 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.54□□□□□ -0.08
Trdmt1O55055 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Gm5363-201ENSMUST00000211927 938 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.54□□□□□ -0.08
Trdmt1O55055 Gm22042-201ENSMUST00000082989 165 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Gm26232-201ENSMUST00000083360 166 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Gm24136-201ENSMUST00000083374 165 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Gm26110-201ENSMUST00000083971 165 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.54□□□□□ -0.08
Trdmt1O55055 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Trdmt1O55055 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.54□□□□□ -0.08
Trdmt1O55055 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trdmt1O55055 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Trdmt1O55055 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.54□□□□□ -0.08
Trdmt1O55055 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trdmt1O55055 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Trdmt1O55055 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trdmt1O55055 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
Trdmt1O55055 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trdmt1O55055 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trdmt1O55055 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trdmt1O55055 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.53□□□□□ -0.08
Trdmt1O55055 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trdmt1O55055 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trdmt1O55055 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trdmt1O55055 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trdmt1O55055 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.53□□□□□ -0.08
Trdmt1O55055 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.53□□□□□ -0.08
Trdmt1O55055 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trdmt1O55055 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.53□□□□□ -0.08
Trdmt1O55055 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Trdmt1O55055 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trdmt1O55055 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.53□□□□□ -0.08
Trdmt1O55055 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms