Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Atf6bO35451 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Gm12091-201ENSMUST00000146791 830 ntBASIC11.57□□□□□ -0.56
Atf6bO35451 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.57□□□□□ -0.56
Atf6bO35451 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.57□□□□□ -0.56
Atf6bO35451 Gm6745-201ENSMUST00000199216 526 ntBASIC11.57□□□□□ -0.56
Atf6bO35451 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Atf6bO35451 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.57□□□□□ -0.56
Atf6bO35451 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Atf6bO35451 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Atf6bO35451 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf6bO35451 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Atf6bO35451 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.56□□□□□ -0.56
Atf6bO35451 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Atf6bO35451 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Gm15770-201ENSMUST00000117498 584 ntBASIC11.56□□□□□ -0.56
Atf6bO35451 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Atf6bO35451 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.56□□□□□ -0.56
Atf6bO35451 Mir7654-201ENSMUST00000185082 70 ntBASIC11.56□□□□□ -0.56
Atf6bO35451 Gm9794-201ENSMUST00000202370 423 ntBASIC11.56□□□□□ -0.56
Atf6bO35451 Gm18307-201ENSMUST00000206864 949 ntBASIC11.56□□□□□ -0.56
Atf6bO35451 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.56□□□□□ -0.56
Atf6bO35451 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Atf6bO35451 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Atf6bO35451 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Atf6bO35451 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Atf6bO35451 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Atf6bO35451 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atf6bO35451 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atf6bO35451 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atf6bO35451 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Atf6bO35451 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atf6bO35451 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Atf6bO35451 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.55□□□□□ -0.56
Atf6bO35451 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atf6bO35451 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atf6bO35451 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Atf6bO35451 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atf6bO35451 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atf6bO35451 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atf6bO35451 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atf6bO35451 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Atf6bO35451 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.55□□□□□ -0.56
Atf6bO35451 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Atf6bO35451 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Atf6bO35451 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Atf6bO35451 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.55□□□□□ -0.56
Atf6bO35451 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Atf6bO35451 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atf6bO35451 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.55□□□□□ -0.56
Atf6bO35451 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.55□□□□□ -0.56
Atf6bO35451 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.55□□□□□ -0.56
Atf6bO35451 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.55□□□□□ -0.56
Atf6bO35451 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.55□□□□□ -0.56
Atf6bO35451 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Atf6bO35451 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atf6bO35451 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atf6bO35451 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms