Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Gm14701-201ENSMUST00000117156 348 ntBASIC10.51□□□□□ -0.73
Efnb3O35393 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.51□□□□□ -0.73
Efnb3O35393 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Efnb3O35393 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Efnb3O35393 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Efnb3O35393 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.51□□□□□ -0.73
Efnb3O35393 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC10.51□□□□□ -0.73
Efnb3O35393 Gm8927-201ENSMUST00000181978 981 ntBASIC10.51□□□□□ -0.73
Efnb3O35393 Gm33320-201ENSMUST00000192232 530 ntBASIC10.51□□□□□ -0.73
Efnb3O35393 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.51□□□□□ -0.73
Efnb3O35393 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.51□□□□□ -0.73
Efnb3O35393 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Efnb3O35393 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Efnb3O35393 Gm3222-201ENSMUST00000071282 990 ntBASIC10.51□□□□□ -0.73
Efnb3O35393 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.51□□□□□ -0.73
Efnb3O35393 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Efnb3O35393 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.51□□□□□ -0.73
Efnb3O35393 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.51□□□□□ -0.73
Efnb3O35393 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.51□□□□□ -0.73
Efnb3O35393 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Efnb3O35393 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Efnb3O35393 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Efnb3O35393 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.5□□□□□ -0.73
Efnb3O35393 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.5□□□□□ -0.73
Efnb3O35393 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC10.5□□□□□ -0.73
Efnb3O35393 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.5□□□□□ -0.73
Efnb3O35393 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC10.5□□□□□ -0.73
Efnb3O35393 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Efnb3O35393 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Mir449b-201ENSMUST00000104833 80 ntBASIC10.5□□□□□ -0.73
Efnb3O35393 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Efnb3O35393 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.5□□□□□ -0.73
Efnb3O35393 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Gm7774-201ENSMUST00000200064 533 ntBASIC10.5□□□□□ -0.73
Efnb3O35393 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.5□□□□□ -0.73
Efnb3O35393 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Efnb3O35393 Gm16476-201ENSMUST00000221544 139 ntBASIC10.5□□□□□ -0.73
Efnb3O35393 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Efnb3O35393 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.5□□□□□ -0.73
Efnb3O35393 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Efnb3O35393 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.5□□□□□ -0.73
Efnb3O35393 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Efnb3O35393 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Efnb3O35393 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Efnb3O35393 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Efnb3O35393 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Efnb3O35393 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.49□□□□□ -0.73
Efnb3O35393 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms