Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Raet1bO08603 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Raet1bO08603 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.78□□□□□ -0.52
Raet1bO08603 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.78□□□□□ -0.52
Raet1bO08603 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Raet1bO08603 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Mir7221-201ENSMUST00000184009 72 ntBASIC11.78□□□□□ -0.52
Raet1bO08603 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Mir6392-201ENSMUST00000184924 108 ntBASIC11.78□□□□□ -0.52
Raet1bO08603 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.78□□□□□ -0.52
Raet1bO08603 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.78□□□□□ -0.52
Raet1bO08603 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Raet1bO08603 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.78□□□□□ -0.52
Raet1bO08603 Gm26315-201ENSMUST00000083890 321 ntBASIC11.78□□□□□ -0.52
Raet1bO08603 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.78□□□□□ -0.52
Raet1bO08603 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Raet1bO08603 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Raet1bO08603 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.78□□□□□ -0.52
Raet1bO08603 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.78□□□□□ -0.52
Raet1bO08603 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Raet1bO08603 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Raet1bO08603 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Raet1bO08603 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Raet1bO08603 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.77□□□□□ -0.52
Raet1bO08603 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Raet1bO08603 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Raet1bO08603 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Raet1bO08603 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Raet1bO08603 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Raet1bO08603 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Raet1bO08603 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Raet1bO08603 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1bO08603 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1bO08603 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1bO08603 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1bO08603 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1bO08603 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1bO08603 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Raet1bO08603 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Raet1bO08603 Gm15371-201ENSMUST00000117057 784 ntBASIC11.77□□□□□ -0.53
Raet1bO08603 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.77□□□□□ -0.53
Raet1bO08603 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.77□□□□□ -0.53
Raet1bO08603 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1bO08603 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Raet1bO08603 Mir7654-201ENSMUST00000185082 70 ntBASIC11.77□□□□□ -0.53
Raet1bO08603 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.77□□□□□ -0.53
Raet1bO08603 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.77□□□□□ -0.53
Raet1bO08603 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1bO08603 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.77□□□□□ -0.53
Raet1bO08603 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.77□□□□□ -0.53
Raet1bO08603 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.77□□□□□ -0.53
Raet1bO08603 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1bO08603 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Raet1bO08603 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1bO08603 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1bO08603 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1bO08603 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.77□□□□□ -0.53
Raet1bO08603 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1bO08603 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1bO08603 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.77□□□□□ -0.53
Raet1bO08603 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Raet1bO08603 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.77□□□□□ -0.53
Raet1bO08603 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1bO08603 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1bO08603 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1bO08603 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Raet1bO08603 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1bO08603 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1bO08603 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Raet1bO08603 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Raet1bO08603 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms