Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Gm25287-201ENSMUST00000103846 110 ntBASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Gm22918-201ENSMUST00000103855 110 ntBASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Gm18206-201ENSMUST00000207027 926 ntBASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Gm15770-201ENSMUST00000117498 584 ntBASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Gm44335-201ENSMUST00000196879 141 ntBASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Gm44297-201ENSMUST00000198304 141 ntBASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Gm44346-201ENSMUST00000198851 141 ntBASIC12.09□□□□□ -0.47
Shisa8J3QNX5 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Shd-206ENSMUST00000225145 998 ntBASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Shisa8J3QNX5 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Shisa8J3QNX5 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Shisa8J3QNX5 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.08□□□□□ -0.47
Shisa8J3QNX5 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Shisa8J3QNX5 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.08□□□□□ -0.48
Shisa8J3QNX5 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms