Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ccdc149F6V035 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc149F6V035 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc149F6V035 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc149F6V035 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc149F6V035 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc149F6V035 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc149F6V035 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc149F6V035 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc149F6V035 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc149F6V035 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc149F6V035 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc149F6V035 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc149F6V035 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc149F6V035 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.46□□□□□ -0.25
Ccdc149F6V035 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Gm38266-201ENSMUST00000194931 421 ntBASIC13.46□□□□□ -0.25
Ccdc149F6V035 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc149F6V035 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.46□□□□□ -0.26
Ccdc149F6V035 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Ccdc149F6V035 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc149F6V035 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc149F6V035 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc149F6V035 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc149F6V035 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc149F6V035 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc149F6V035 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.45□□□□□ -0.26
Ccdc149F6V035 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc149F6V035 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc149F6V035 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.44□□□□□ -0.26
Ccdc149F6V035 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc149F6V035 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc149F6V035 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Ccdc149F6V035 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc149F6V035 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Ccdc149F6V035 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc149F6V035 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc149F6V035 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms