Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Gm28882-201ENSMUST00000185504 314 ntBASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Gm12684-201ENSMUST00000118675 999 ntBASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Col6a3E9PWQ3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Gm26957-201ENSMUST00000182645 977 ntBASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Gm43997-201ENSMUST00000203986 1005 ntBASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Gm6905-201ENSMUST00000205729 511 ntBASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Gm13736-201ENSMUST00000119272 253 ntBASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col6a3E9PWQ3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Gm13916-201ENSMUST00000117368 628 ntBASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Gm22442-201ENSMUST00000157256 144 ntBASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Gm8451-201ENSMUST00000170338 447 ntBASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Gm7536-201ENSMUST00000077389 444 ntBASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Gm5453-201ENSMUST00000080866 447 ntBASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Gm12196-201ENSMUST00000120954 262 ntBASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Gm44814-201ENSMUST00000207018 434 ntBASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col6a3E9PWQ3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms