Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col4a6B1AVK5 Gm12314-201ENSMUST00000118104 538 ntBASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Gm12266-201ENSMUST00000120311 962 ntBASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Gm14999-201ENSMUST00000121039 624 ntBASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Gm9550-201ENSMUST00000161130 862 ntBASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Gm5070-201ENSMUST00000177599 862 ntBASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Gm44126-201ENSMUST00000204831 514 ntBASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Gm45598-202ENSMUST00000210719 986 ntBASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col4a6B1AVK5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Gm44545-201ENSMUST00000208262 746 ntBASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.36□□□□□ -0.27
Col4a6B1AVK5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Gm42937-201ENSMUST00000197360 752 ntBASIC13.35□□□□□ -0.27
Col4a6B1AVK5 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col4a6B1AVK5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms