Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chd3B1AR17 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd3B1AR17 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chd3B1AR17 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chd3B1AR17 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd3B1AR17 Gm38002-201ENSMUST00000193255 180 ntBASIC12.99□□□□□ -0.33
Chd3B1AR17 Gm4768-201ENSMUST00000206199 686 ntBASIC12.99□□□□□ -0.33
Chd3B1AR17 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.99□□□□□ -0.33
Chd3B1AR17 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.99□□□□□ -0.33
Chd3B1AR17 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd3B1AR17 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chd3B1AR17 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd3B1AR17 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd3B1AR17 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.99□□□□□ -0.33
Chd3B1AR17 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd3B1AR17 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd3B1AR17 Grk6-205ENSMUST00000224653 2976 ntBASIC12.99□□□□□ -0.33
Chd3B1AR17 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Chd3B1AR17 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chd3B1AR17 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd3B1AR17 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.98□□□□□ -0.33
Chd3B1AR17 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Chd3B1AR17 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Gm45331-201ENSMUST00000209868 554 ntBASIC12.98□□□□□ -0.33
Chd3B1AR17 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.98□□□□□ -0.33
Chd3B1AR17 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Chd3B1AR17 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.98□□□□□ -0.33
Chd3B1AR17 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Chd3B1AR17 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Chd3B1AR17 Gm8805-201ENSMUST00000117848 313 ntBASIC12.98□□□□□ -0.33
Chd3B1AR17 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.98□□□□□ -0.33
Chd3B1AR17 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Chd3B1AR17 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.98□□□□□ -0.33
Chd3B1AR17 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.98□□□□□ -0.33
Chd3B1AR17 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.98□□□□□ -0.33
Chd3B1AR17 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Chd3B1AR17 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd3B1AR17 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.97□□□□□ -0.33
Chd3B1AR17 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Chd3B1AR17 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Chd3B1AR17 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.97□□□□□ -0.33
Chd3B1AR17 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Chd3B1AR17 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.97□□□□□ -0.33
Chd3B1AR17 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.97□□□□□ -0.33
Chd3B1AR17 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.97□□□□□ -0.33
Chd3B1AR17 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.97□□□□□ -0.33
Chd3B1AR17 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.97□□□□□ -0.33
Chd3B1AR17 Gm7399-201ENSMUST00000032395 858 ntBASIC12.97□□□□□ -0.33
Chd3B1AR17 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Chd3B1AR17 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Chd3B1AR17 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.97□□□□□ -0.33
Chd3B1AR17 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Gm3890-201ENSMUST00000182416 207 ntBASIC12.97□□□□□ -0.33
Chd3B1AR17 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.97□□□□□ -0.33
Chd3B1AR17 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.97□□□□□ -0.33
Chd3B1AR17 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd3B1AR17 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms