Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Gm9522-201ENSMUST00000182394 926 ntBASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Gm12485-201ENSMUST00000119641 291 ntBASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Gm20445-201ENSMUST00000061905 565 ntBASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc194A0A140LIT1 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Mir6956-201ENSMUST00000183598 62 ntBASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.21□□□□□ -0.29
Ccdc194A0A140LIT1 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc194A0A140LIT1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.21□□□□□ -0.3
Ccdc194A0A140LIT1 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
Ccdc194A0A140LIT1 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms