Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 AA619741-201ENSMUST00000195095 646 ntBASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm7229-201ENSMUST00000214719 1007 ntBASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm9727-201ENSMUST00000161387 555 ntBASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 AC174742.1-201ENSMUST00000218272 304 ntBASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms