Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Gm15770-201ENSMUST00000117498 584 ntBASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav5-4A0A075B652 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Gm18905-201ENSMUST00000205454 928 ntBASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trav5-4A0A075B652 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav5-4A0A075B652 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav5-4A0A075B652 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav5-4A0A075B652 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.63
Trav5-4A0A075B652 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trav5-4A0A075B652 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.63
Trav5-4A0A075B652 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav5-4A0A075B652 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav5-4A0A075B652 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav5-4A0A075B652 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms