Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Gm44401-201ENSMUST00000204462 2375 ntBASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Gm13294-201ENSMUST00000121757 1330 ntBASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Gm6184-201ENSMUST00000120403 1261 ntBASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Gm43332-201ENSMUST00000202511 1044 ntBASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 AV026068-213ENSMUST00000223675 1171 ntBASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 CT030704.2-201ENSMUST00000228887 494 ntBASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav8-1A0A075B641 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Gm42863-201ENSMUST00000197875 2958 ntBASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Gm28033-201ENSMUST00000184224 96 ntBASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Gm2272-201ENSMUST00000194903 582 ntBASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav8-1A0A075B641 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms