Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Gm16202-201ENSMUST00000117532 544 ntBASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Gm10156-201ENSMUST00000122364 462 ntBASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Gm24196-201ENSMUST00000179161 110 ntBASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav7n-5A0A075B604 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Gm12500-202ENSMUST00000186471 2428 ntBASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Gm44069-201ENSMUST00000204898 506 ntBASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Gm37019-201ENSMUST00000192133 2134 ntBASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav7n-5A0A075B604 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms