Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Gm15653-201ENSMUST00000119247 907 ntBASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Gm14494-201ENSMUST00000118786 435 ntBASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Mir1897-201ENSMUST00000122581 272 ntBASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Gm10766-202ENSMUST00000194123 606 ntBASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Gm43125-201ENSMUST00000201724 730 ntBASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Gm5425-201ENSMUST00000214125 459 ntBASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1bQ9Z2C6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Gm15393-201ENSMUST00000120499 219 ntBASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Mir6990-201ENSMUST00000183724 91 ntBASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Gm9229-201ENSMUST00000222777 126 ntBASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1bQ9Z2C6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms