Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcb1Q9Z0H3 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.77□□□□□ -0.2
Smarcb1Q9Z0H3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcb1Q9Z0H3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcb1Q9Z0H3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcb1Q9Z0H3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcb1Q9Z0H3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Smarcb1Q9Z0H3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcb1Q9Z0H3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcb1Q9Z0H3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Gm6458-201ENSMUST00000211573 635 ntBASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Gm19163-201ENSMUST00000223313 780 ntBASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Smarcb1Q9Z0H3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Gm25261-201ENSMUST00000157416 134 ntBASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.75□□□□□ -0.21
Smarcb1Q9Z0H3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms