Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.02□□□□□ -0.33
Atp6ap1Q9R1Q9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atp6ap1Q9R1Q9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm5276-201ENSMUST00000196683 1047 ntBASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm45841-201ENSMUST00000207700 164 ntBASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm9924-202ENSMUST00000192760 2311 ntBASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13□□□□□ -0.33
Atp6ap1Q9R1Q9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Grk6-205ENSMUST00000224653 2976 ntBASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Atp6ap1Q9R1Q9 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms