Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Gm28760-201ENSMUST00000185995 736 ntBASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Gm12859-201ENSMUST00000117834 427 ntBASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Gm27772-201ENSMUST00000184900 187 ntBASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Gm37015-201ENSMUST00000192763 1521 ntBASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61a2Q9JLR1 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sec61a2Q9JLR1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms