Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Gm8810-201ENSMUST00000172895 754 ntBASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Upk3aQ9JKX8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk3aQ9JKX8 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk3aQ9JKX8 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk3aQ9JKX8 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Upk3aQ9JKX8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.77□□□□□ -0.36
Upk3aQ9JKX8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk3aQ9JKX8 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Upk3aQ9JKX8 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk3aQ9JKX8 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk3aQ9JKX8 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Upk3aQ9JKX8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Gm11618-201ENSMUST00000117946 267 ntBASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Gm27486-201ENSMUST00000184923 80 ntBASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3aQ9JKX8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms