Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Gm5279-201ENSMUST00000199575 745 ntBASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tubb3Q9ERD7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tubb3Q9ERD7 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Tubb3Q9ERD7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tubb3Q9ERD7 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.21□□□□□ -0.29
Tubb3Q9ERD7 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.21□□□□□ -0.29
Tubb3Q9ERD7 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tubb3Q9ERD7 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Tubb3Q9ERD7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tubb3Q9ERD7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tubb3Q9ERD7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tubb3Q9ERD7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tubb3Q9ERD7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Tubb3Q9ERD7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tubb3Q9ERD7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tubb3Q9ERD7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tubb3Q9ERD7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tubb3Q9ERD7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.21□□□□□ -0.29
Tubb3Q9ERD7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tubb3Q9ERD7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.21□□□□□ -0.29
Tubb3Q9ERD7 Gm12341-201ENSMUST00000119724 503 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms