Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rrp8Q9DB85 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp8Q9DB85 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp8Q9DB85 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp8Q9DB85 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp8Q9DB85 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.01□□□□□ -0.33
Rrp8Q9DB85 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.01□□□□□ -0.33
Rrp8Q9DB85 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp8Q9DB85 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp8Q9DB85 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.01□□□□□ -0.33
Rrp8Q9DB85 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.01□□□□□ -0.33
Rrp8Q9DB85 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp8Q9DB85 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rrp8Q9DB85 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rrp8Q9DB85 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rrp8Q9DB85 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13□□□□□ -0.33
Rrp8Q9DB85 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Rrp8Q9DB85 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13□□□□□ -0.33
Rrp8Q9DB85 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rrp8Q9DB85 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Rrp8Q9DB85 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rrp8Q9DB85 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rrp8Q9DB85 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Gm26461-201ENSMUST00000175064 290 ntBASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Gm6082-201ENSMUST00000215204 454 ntBASIC12.99□□□□□ -0.33
Rrp8Q9DB85 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rrp8Q9DB85 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrp8Q9DB85 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrp8Q9DB85 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rrp8Q9DB85 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrp8Q9DB85 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.98□□□□□ -0.33
Rrp8Q9DB85 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrp8Q9DB85 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Rrp8Q9DB85 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrp8Q9DB85 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms