Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.44□□□□□ -0.26
Sf3a3Q9D554 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.44□□□□□ -0.26
Sf3a3Q9D554 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sf3a3Q9D554 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.43□□□□□ -0.26
Sf3a3Q9D554 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 AA543401-201ENSMUST00000164248 1269 ntBASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.43□□□□□ -0.26
Sf3a3Q9D554 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm29310-201ENSMUST00000185468 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm21825-201ENSMUST00000185728 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm29109-201ENSMUST00000185895 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm21896-201ENSMUST00000186520 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm21873-201ENSMUST00000186728 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm21794-201ENSMUST00000187056 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm21880-201ENSMUST00000187275 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm21826-201ENSMUST00000187451 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm21198-201ENSMUST00000188393 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm21749-201ENSMUST00000189343 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm21901-201ENSMUST00000189568 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm29424-201ENSMUST00000189716 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm28599-201ENSMUST00000189838 694 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm21867-201ENSMUST00000189917 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm29269-201ENSMUST00000190087 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm21722-201ENSMUST00000190153 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm28423-201ENSMUST00000190701 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm21899-201ENSMUST00000190745 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm21910-201ENSMUST00000191163 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm21849-201ENSMUST00000191571 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm28678-201ENSMUST00000191593 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm20910-201ENSMUST00000193268 696 ntBASIC13.42□□□□□ -0.26
Sf3a3Q9D554 Gm21871-201ENSMUST00000194621 696 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms