Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1aQ9D132 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Upk1aQ9D132 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1aQ9D132 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1aQ9D132 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1aQ9D132 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.61□□□□□ -0.39
Upk1aQ9D132 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.61□□□□□ -0.39
Upk1aQ9D132 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1aQ9D132 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Upk1aQ9D132 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1aQ9D132 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1aQ9D132 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1aQ9D132 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1aQ9D132 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1aQ9D132 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.61□□□□□ -0.39
Upk1aQ9D132 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1aQ9D132 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.61□□□□□ -0.39
Upk1aQ9D132 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1aQ9D132 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1aQ9D132 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1aQ9D132 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Upk1aQ9D132 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.6□□□□□ -0.39
Upk1aQ9D132 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.6□□□□□ -0.39
Upk1aQ9D132 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Gm8410-201ENSMUST00000117225 605 ntBASIC12.6□□□□□ -0.39
Upk1aQ9D132 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Gm4804-201ENSMUST00000182234 999 ntBASIC12.6□□□□□ -0.39
Upk1aQ9D132 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.6□□□□□ -0.39
Upk1aQ9D132 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.6□□□□□ -0.39
Upk1aQ9D132 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.6□□□□□ -0.39
Upk1aQ9D132 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.6□□□□□ -0.39
Upk1aQ9D132 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Upk1aQ9D132 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.59□□□□□ -0.39
Upk1aQ9D132 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.59□□□□□ -0.39
Upk1aQ9D132 Gm15240-201ENSMUST00000118156 720 ntBASIC12.59□□□□□ -0.39
Upk1aQ9D132 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.59□□□□□ -0.39
Upk1aQ9D132 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.59□□□□□ -0.39
Upk1aQ9D132 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.59□□□□□ -0.39
Upk1aQ9D132 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.59□□□□□ -0.39
Upk1aQ9D132 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.59□□□□□ -0.39
Upk1aQ9D132 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.59□□□□□ -0.39
Upk1aQ9D132 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.59□□□□□ -0.39
Upk1aQ9D132 Gm12403-201ENSMUST00000121384 959 ntBASIC12.59□□□□□ -0.39
Upk1aQ9D132 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.59□□□□□ -0.39
Upk1aQ9D132 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.59□□□□□ -0.39
Upk1aQ9D132 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.59□□□□□ -0.39
Upk1aQ9D132 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.59□□□□□ -0.39
Upk1aQ9D132 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.59□□□□□ -0.39
Upk1aQ9D132 Gm2213-201ENSMUST00000197485 688 ntBASIC12.59□□□□□ -0.39
Upk1aQ9D132 Gm46209-201ENSMUST00000217912 553 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms