Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Gm13453-201ENSMUST00000118708 357 ntBASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Gm5479-201ENSMUST00000160578 435 ntBASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Gm6888-201ENSMUST00000221983 706 ntBASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 AC158529.1-201ENSMUST00000223618 239 ntBASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Gm27194-201ENSMUST00000175753 2936 ntBASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Gm43860-201ENSMUST00000201742 2705 ntBASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Mrpl55Q9CZ83 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Gm43195-201ENSMUST00000200614 2332 ntBASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Gm13464-201ENSMUST00000119418 935 ntBASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Gm14767-201ENSMUST00000121559 586 ntBASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Mir8102-201ENSMUST00000184148 139 ntBASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 AC090659.2-201ENSMUST00000225378 1186 ntBASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 AC124751.1-201ENSMUST00000222716 1408 ntBASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Gm6157-201ENSMUST00000199935 1897 ntBASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Mrpl55Q9CZ83 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Mrpl55Q9CZ83 Gm42872-201ENSMUST00000200026 1967 ntBASIC8.84□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms