Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssr1Q9CY50 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Gm27618-201ENSMUST00000183671 60 ntBASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.49□□□□□ -0.09
Ssr1Q9CY50 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ssr1Q9CY50 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Gm13385-201ENSMUST00000121089 220 ntBASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssr1Q9CY50 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.47□□□□□ -0.09
Ssr1Q9CY50 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms