Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.65■□□□□ 0.1
Smc3Q9CW03 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.65■□□□□ 0.1
Smc3Q9CW03 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.65■□□□□ 0.1
Smc3Q9CW03 Gm12403-201ENSMUST00000121384 959 ntBASIC15.65■□□□□ 0.1
Smc3Q9CW03 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.65■□□□□ 0.1
Smc3Q9CW03 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.65■□□□□ 0.1
Smc3Q9CW03 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.65■□□□□ 0.1
Smc3Q9CW03 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.65■□□□□ 0.1
Smc3Q9CW03 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.65■□□□□ 0.1
Smc3Q9CW03 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.65■□□□□ 0.1
Smc3Q9CW03 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Smc3Q9CW03 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Smc3Q9CW03 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.64■□□□□ 0.09
Smc3Q9CW03 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Smc3Q9CW03 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc3Q9CW03 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Gm9522-201ENSMUST00000182394 926 ntBASIC15.63■□□□□ 0.09
Smc3Q9CW03 Mir7221-201ENSMUST00000184009 72 ntBASIC15.63■□□□□ 0.09
Smc3Q9CW03 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc3Q9CW03 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc3Q9CW03 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Smc3Q9CW03 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Smc3Q9CW03 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc3Q9CW03 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc3Q9CW03 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc3Q9CW03 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smc3Q9CW03 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc3Q9CW03 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc3Q9CW03 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smc3Q9CW03 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms