Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Gm3096-201ENSMUST00000185770 364 ntBASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cldnd1Q9CQX5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Gm20426-201ENSMUST00000173657 440 ntBASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Gm25700-201ENSMUST00000177693 110 ntBASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cldnd1Q9CQX5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.52□□□□□ -0.24
Cldnd1Q9CQX5 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cldnd1Q9CQX5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cldnd1Q9CQX5 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cldnd1Q9CQX5 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.52□□□□□ -0.24
Cldnd1Q9CQX5 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cldnd1Q9CQX5 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Gm11978-201ENSMUST00000122315 466 ntBASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Mir1943-201ENSMUST00000158276 73 ntBASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldnd1Q9CQX5 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.51□□□□□ -0.25
Cldnd1Q9CQX5 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldnd1Q9CQX5 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms