Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Gm14058-201ENSMUST00000116082 735 ntBASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Mir671-201ENSMUST00000102432 98 ntBASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh23Q99PF4 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Gm13888-201ENSMUST00000119148 422 ntBASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Gm34023-201ENSMUST00000195539 217 ntBASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Mir7686-201ENSMUST00000200604 57 ntBASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Gm11354-201ENSMUST00000121974 422 ntBASIC13.18□□□□□ -0.3
Cdh23Q99PF4 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Gm27530-201ENSMUST00000184096 98 ntBASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Gm19187-201ENSMUST00000206781 892 ntBASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Gm3318-201ENSMUST00000217604 1183 ntBASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh23Q99PF4 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.17□□□□□ -0.3
Cdh23Q99PF4 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Snora73b-201ENSMUST00000083419 205 ntBASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdh23Q99PF4 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms