Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Raf1Q99N57 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Raf1Q99N57 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Raf1Q99N57 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Raf1Q99N57 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.99□□□□□ -0.49
Raf1Q99N57 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.99□□□□□ -0.49
Raf1Q99N57 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.99□□□□□ -0.49
Raf1Q99N57 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.99□□□□□ -0.49
Raf1Q99N57 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Raf1Q99N57 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Raf1Q99N57 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Raf1Q99N57 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Raf1Q99N57 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.99□□□□□ -0.49
Raf1Q99N57 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Raf1Q99N57 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.98□□□□□ -0.49
Raf1Q99N57 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Raf1Q99N57 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Raf1Q99N57 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.98□□□□□ -0.49
Raf1Q99N57 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.98□□□□□ -0.49
Raf1Q99N57 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Gm27533-201ENSMUST00000183800 152 ntBASIC11.98□□□□□ -0.49
Raf1Q99N57 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.98□□□□□ -0.49
Raf1Q99N57 Gm7775-201ENSMUST00000218871 853 ntBASIC11.98□□□□□ -0.49
Raf1Q99N57 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.98□□□□□ -0.49
Raf1Q99N57 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Raf1Q99N57 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Raf1Q99N57 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Raf1Q99N57 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.97□□□□□ -0.49
Raf1Q99N57 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.97□□□□□ -0.49
Raf1Q99N57 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.97□□□□□ -0.49
Raf1Q99N57 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.97□□□□□ -0.49
Raf1Q99N57 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.97□□□□□ -0.49
Raf1Q99N57 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Raf1Q99N57 Mir125a-201ENSMUST00000083545 68 ntBASIC11.97□□□□□ -0.49
Raf1Q99N57 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms