Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Gm26361-201ENSMUST00000158868 186 ntBASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col25a1Q99MQ5 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Gm8927-201ENSMUST00000181978 981 ntBASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col25a1Q99MQ5 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Gm23270-201ENSMUST00000104055 131 ntBASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Col25a1Q99MQ5 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms