Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Gm9797-201ENSMUST00000052902 613 ntBASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Syt7-204ENSMUST00000223586 1344 ntBASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Syt7-205ENSMUST00000224135 1557 ntBASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Gm27772-201ENSMUST00000184900 187 ntBASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp1b1Q99LU0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Gm24694-201ENSMUST00000180054 110 ntBASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Gm27663-201ENSMUST00000184839 110 ntBASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Gm28760-201ENSMUST00000185995 736 ntBASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.59□□□□□ -0.39
Chmp1b1Q99LU0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms