Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Gm14109-201ENSMUST00000118814 309 ntBASIC16.32■□□□□ 0.2
RtcbQ99LF4 Gm13461-201ENSMUST00000120980 662 ntBASIC16.32■□□□□ 0.2
RtcbQ99LF4 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RtcbQ99LF4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Gm25732-201ENSMUST00000175168 60 ntBASIC16.32■□□□□ 0.2
RtcbQ99LF4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Gm8885-201ENSMUST00000189382 598 ntBASIC16.32■□□□□ 0.2
RtcbQ99LF4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Gm29787-201ENSMUST00000222129 849 ntBASIC16.32■□□□□ 0.2
RtcbQ99LF4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RtcbQ99LF4 AC161537.1-201ENSMUST00000226199 1015 ntBASIC16.32■□□□□ 0.2
RtcbQ99LF4 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RtcbQ99LF4 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.32■□□□□ 0.2
RtcbQ99LF4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.31■□□□□ 0.2
RtcbQ99LF4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Gm5523-201ENSMUST00000180415 997 ntBASIC16.31■□□□□ 0.2
RtcbQ99LF4 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC16.31■□□□□ 0.2
RtcbQ99LF4 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC16.31■□□□□ 0.2
RtcbQ99LF4 Gm3096-201ENSMUST00000185770 364 ntBASIC16.31■□□□□ 0.2
RtcbQ99LF4 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Gm8959-201ENSMUST00000213150 571 ntBASIC16.31■□□□□ 0.2
RtcbQ99LF4 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RtcbQ99LF4 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Gm37737-201ENSMUST00000195013 1638 ntBASIC16.3■□□□□ 0.2
RtcbQ99LF4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Crry-ps-201ENSMUST00000079090 1309 ntBASIC16.3■□□□□ 0.2
RtcbQ99LF4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Gm13875-201ENSMUST00000120162 282 ntBASIC16.3■□□□□ 0.2
RtcbQ99LF4 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Gm28450-201ENSMUST00000187349 638 ntBASIC16.3■□□□□ 0.2
RtcbQ99LF4 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.3■□□□□ 0.2
RtcbQ99LF4 Gm43378-201ENSMUST00000199336 582 ntBASIC16.3■□□□□ 0.2
RtcbQ99LF4 Gm44262-201ENSMUST00000204969 372 ntBASIC16.3■□□□□ 0.2
RtcbQ99LF4 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC16.3■□□□□ 0.2
RtcbQ99LF4 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.3■□□□□ 0.2
RtcbQ99LF4 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.29■□□□□ 0.2
RtcbQ99LF4 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms