Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cstf1Q99LC2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Gm13123-201ENSMUST00000122173 492 ntBASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Gm7809-201ENSMUST00000153199 742 ntBASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.29□□□□□ -0.28
Cstf1Q99LC2 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cstf1Q99LC2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Gm8805-201ENSMUST00000117848 313 ntBASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Gm12403-201ENSMUST00000121384 959 ntBASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Gm2231-201ENSMUST00000125661 612 ntBASIC13.28□□□□□ -0.28
Cstf1Q99LC2 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Gm24990-201ENSMUST00000157406 323 ntBASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cstf1Q99LC2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms