Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Mir125a-201ENSMUST00000083545 68 ntBASIC13.41□□□□□ -0.26
Cdk9Q99J95 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.41□□□□□ -0.26
Cdk9Q99J95 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.41□□□□□ -0.26
Cdk9Q99J95 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk9Q99J95 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Mir698-201ENSMUST00000102164 109 ntBASIC13.4□□□□□ -0.26
Cdk9Q99J95 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Mir6990-201ENSMUST00000183724 91 ntBASIC13.4□□□□□ -0.26
Cdk9Q99J95 Gm27631-201ENSMUST00000184163 466 ntBASIC13.4□□□□□ -0.26
Cdk9Q99J95 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Cdk9Q99J95 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.4□□□□□ -0.26
Cdk9Q99J95 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.4□□□□□ -0.26
Cdk9Q99J95 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.4□□□□□ -0.26
Cdk9Q99J95 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdk9Q99J95 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cdk9Q99J95 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cdk9Q99J95 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Cdk9Q99J95 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cdk9Q99J95 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
Cdk9Q99J95 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cdk9Q99J95 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cdk9Q99J95 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk9Q99J95 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms