Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Gm25509-201ENSMUST00000116985 106 ntBASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Gm12467-201ENSMUST00000117625 745 ntBASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Gm10275-202ENSMUST00000168697 495 ntBASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Gm10275-201ENSMUST00000092620 635 ntBASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb3Q91XZ7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Gm45071-201ENSMUST00000205353 571 ntBASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 AC172027.1-201ENSMUST00000217659 337 ntBASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Gm5779-201ENSMUST00000218467 910 ntBASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdhb3Q91XZ7 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdhb3Q91XZ7 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb3Q91XZ7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms